生物信息学中的算法Algorithms in Bioinformatics
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作者： Olivier Gascuel等著
出 版 社： Oversea Publishing House
出版时间： 2001-9-1字数：版次： 1页数： 306印刷时间： 2001/09/01开本： 16开印次： 1纸张： 胶版纸I S B N ： 9783540425168包装： 平装内容简介
This book constitutes the refereed proceedings of the First International Workshop on Algorithms in Bioinformatics, WABI 2001, held in Aarhus, Denmark, in August 2001.
The 23 revised full papers presented were carefully reviewed and selected from more than 50 submissions. Among the issues addressed are exact and approximate algorithms for genomics, sequence analysis, gene and signal recognition, alignment, molecular evolution, structure determination or prediction, gene expression and gene networks, proteomics, functional genomics, and drug design; methodological topics from algorithmics; high-performance approaches to hard computational problems in bioinformatics.
目录
An Improved Model for Statistical Alignment
Improving Profile-Profile Alignments via Log Average Scoring
False Positives in Genomic Map Assembly and Sequence Validation
Boosting EM for Radiation Hybrid and Genetic Mapping
Placing Probes along the Genome Using Pairwise Distance Data
Comparing a Hidden Markov Model and a Stochastic Context-Free Grammar
Assessing the Statistical Significance of Overrepresented Oligonucleotides
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
Computing Linking Numbers of a Filtration
Side Chain-Positioning as an Integer Programming Problem
A Chemical-Distance-Based Test for Positive Darwinian Selection
Finding a Maximum Compatible Tree for a Bounded Number of Trees with Bounded Degree Is Solvable in Polynomial Time
Experiments in Computing Sequences of Reversals
Exact-IEBP: A New Technique for Estimating Evolutionary Distances between Whole Genomes
Finding an Optimal Inversion Median: Experimental Results
Analytic Solutions for Three-Taxon ML[subscript MC] Trees with Variable Rates Across Sites
The Performance of Phylogenetic Methods on Trees of Bounded Diameter
(1+[epsilon])-Approximation of Sorting by Reversals and Transpositions
On the Practical Solution of the Reversal Median Problem
Algorithms for Finding Gene Clusters
Determination of Binding Amino Acids Based on Random Peptide Array Screening Data
A Simple Hyper-Geometric Approach for Discovering Putative Transcription Factor Binding Sites
Comparing Assemblies Using Fragments and Mate-Pairs
Author Index
